Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | SPO_RS03075 | Q0K998 | Positive | 629200 - 630264 | 38016.4 |
| abc transporter atp-binding protein | SPO_RS03080 | P55604 | Positive | 630272 - 631357 | 39393.4 |
| carbohydrate abc transporter permease | SPO_RS03085 | O32155 | Positive | 631354 - 632217 | 32471.4 |
| carbohydrate abc transporter permease | SPO_RS03090 | Q9K489 | Positive | 632229 - 633026 | 29665.8 |
| duf2160 domain-containing protein | SPO_RS03095 | Not Available | Positive | 633026 - 633304 | 10119.8 |
| blai/meci/copy family transcriptional regulator | SPO_RS03100 | Not Available | Positive | 633392 - 633787 | 14851.8 |
| m56 family metallopeptidase | SPO_RS03105 | Not Available | Positive | 633777 - 634910 | 42399.3 |
| nadph:quinone reductase | SPO_RS03110 | Not Available | Positive | 634996 - 635988 | 33598.3 |
| Trna-gln | Not Available | Not Available | Positive | 636093 - 636167 | Not Available |
| arac family transcriptional regulator | SPO_RS03120 | Not Available | Negative | 636307 - 637353 | 37814.6 |
Pathways
1183 pathways
Health Effects
No health effects information available for this bacterium.
