Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| agmatinase | SPO_RS03025 | Q72JK8 | Negative | 617618 - 618466 | 30302.2 |
| carboxynorspermidine decarboxylase | SPO_RS03030 | A8FNH9 | Negative | 618463 - 619632 | 42701.9 |
| saccharopine dehydrogenase family protein | SPO_RS03035 | P0DPE4 | Negative | 619737 - 620948 | 44467.9 |
| biosynthetic arginine decarboxylase | SPO_RS03040 | Q7NE10 | Negative | 620974 - 622863 | 69465.5 |
| monooxygenase | SPO_RS03045 | P0ACX3 | Negative | 623032 - 623346 | 11965.2 |
| hypothetical protein | SPO_RS03050 | Not Available | Negative | 623375 - 623752 | 13839.0 |
| marr family winged helix-turn-helix transcriptional regulator | SPO_RS22110 | Not Available | Negative | 623755 - 624207 | 16697.4 |
| aconitase x | SPO_RS03060 | A9CH00 | Positive | 624480 - 626168 | 58482.0 |
| trans-3-hydroxy-l-proline dehydratase | SPO_RS03065 | Q92WR9 | Positive | 626168 - 627193 | 36858.2 |
| abc transporter substrate-binding protein | SPO_RS03070 | Not Available | Positive | 627352 - 629085 | 64236.9 |
Pathways
1183 pathways
Health Effects
No health effects information available for this bacterium.
