Ruegeria pomeroyi DSS-3

Gram-negativeBacilliMotileAerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Ruegeria

Description

Ruegeria pomeroyi DSS-3 is a Gram-negative, aerobic bacterium characterized by its bacilli shape and mobility. It is a heterotrophic organism that thrives in aquatic environments. The strain DSS-3 is mesophilic, indicating it prefers moderate temperature ranges for growth. This bacterium is notable for being free-living, which means it does not rely on a host organism for survival. With a single replicon, Ruegeria pomeroyi DSS-3 can efficiently manage its genetic information, contributing to its adaptability in various aquatic habitats. The strain is cataloged under the accession number NC_003911.12. The ecological relevance of Ruegeria pomeroyi DSS-3 lies in its role in marine ecosystems. As a heterotroph, it contributes to the cycling of organic matter in aquatic environments, potentially influencing nutrient dynamics and the overall health of marine ecosystems. Its mobility may also play a significant role in its ability to colonize different niches within these habitats, further enhancing its ecological impact.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusRuegeria
SpeciesRuegeria pomeroyi
StrainDSS-3

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Ruegeria pomeroyi DSS-3, complete sequence.

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
murein l,d-transpeptidase family proteinSPO_RS00155Not AvailablePositive31568 - 3208618948.7
hypothetical proteinSPO_RS00160Not AvailableNegative32070 - 323459967.11
lysr substrate-binding domain-containing proteinSPO_RS00165Not AvailablePositive32458 - 3336632932.8
sulfotransferase family 2 domain-containing proteinSPO_RS00170Not AvailableNegative33377 - 3481653422.4
beta-1,6-n-acetylglucosaminyltransferaseSPO_RS00175Not AvailableNegative34823 - 3652365140.0
glycosyltransferase family 2 proteinSPO_RS00180Not AvailableNegative36520 - 3750638456.6
glycosyltransferase family 2 proteinSPO_RS00185Not AvailableNegative37703 - 3875239958.2
3-deoxy-manno-octulosonate cytidylyltransferaseSPO_RS00190Q0AST1Negative38766 - 3956628764.3
3'(2'),5'-bisphosphate nucleotidase cysqSPO_RS00195Q8XCG6Negative39567 - 4036428245.1
abc transporter permeaseSPO_RS00200Not AvailablePositive40531 - 4130428794.2

Displaying genes 51 – 60 of 4001 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.