Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s11 | SPO_RS02575 | Q5LW33 | Positive | 507251 - 507643 | 13929.6 |
| dna-directed rna polymerase subunit alpha | SPO_RS02580 | Q5LW32 | Positive | 507760 - 508776 | 37149.2 |
| 50s ribosomal protein l17 | SPO_RS02585 | Q5LW31 | Positive | 508954 - 509376 | 15924.2 |
| hypothetical protein | SPO_RS02590 | Not Available | Positive | 509484 - 509891 | 14759.8 |
| trypsin-like peptidase domain-containing protein | SPO_RS02595 | P39099 | Positive | 509955 - 511337 | 48211.8 |
| replication-associated recombination protein a | SPO_RS02600 | P39918 | Positive | 511341 - 512657 | 48257.7 |
| rlua family pseudouridine synthase | SPO_RS02605 | Q9KQH0 | Positive | 512820 - 513863 | 38066.6 |
| had-ia family hydrolase | SPO_RS02610 | Not Available | Positive | 513860 - 514531 | 23592.5 |
| atp12 family chaperone protein | SPO_RS02615 | Not Available | Positive | 514537 - 515244 | 25956.6 |
| amino acid abc transporter substrate-binding protein | SPO_RS02620 | Not Available | Positive | 515441 - 516457 | 35658.1 |
Pathways
1183 pathways
Health Effects
No health effects information available for this bacterium.
