Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| universal stress protein | SPO_RS02335 | Not Available | Positive | 472365 - 472772 | 14751.9 |
| nyn domain-containing protein | SPO_RS02340 | Not Available | Positive | 472839 - 473417 | 20985.6 |
| hugz family protein | SPO_RS02345 | Not Available | Negative | 473414 - 473896 | 16709.2 |
| formate/nitrite transporter family protein | SPO_RS02350 | O05399 | Negative | 473906 - 474685 | 26248.8 |
| phosphonate metabolism transcriptional regulator phnf | SPO_RS02355 | O86029 | Negative | 474743 - 475453 | 25268.2 |
| phosphonate c-p lyase system protein phng | SPO_RS02360 | Q52984 | Positive | 475557 - 476012 | 16102.4 |
| phosphonate c-p lyase system protein phnh | SPO_RS02365 | Not Available | Positive | 476012 - 476587 | 19988.7 |
| carbon-phosphorus lyase complex subunit phni | SPO_RS02370 | Q52986 | Positive | 476591 - 477682 | 40206.7 |
| alpha-d-ribose 1-methylphosphonate 5-phosphate c-p-lyase phnj | SPO_RS02375 | Q52987 | Positive | 477762 - 478598 | 31414.2 |
| phosphonate c-p lyase system protein phnk | SPO_RS02380 | P16678 | Positive | 478684 - 479454 | 28027.0 |
Pathways
1183 pathways
Health Effects
No health effects information available for this bacterium.
