Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin domain-containing protein | SPO_RS02235 | P0AGG6 | Positive | 455224 - 455649 | 15088.5 |
| duf2892 domain-containing protein | SPO_RS02240 | Not Available | Positive | 455742 - 455942 | 7221.33 |
| hypothetical protein | SPO_RS02245 | Not Available | Negative | 455955 - 456170 | 7453.46 |
| rep-associated tyrosine transposase | SPO_RS02250 | Not Available | Positive | 456283 - 456858 | 21440.8 |
| energy-dependent translational throttle protein etta | SPO_RS02255 | A0A0H2VFI8 | Negative | 456890 - 458545 | 61482.1 |
| hypothetical protein | SPO_RS02260 | Not Available | Positive | 458917 - 459792 | 30780.9 |
| mosc domain-containing protein | SPO_RS02265 | Not Available | Positive | 459950 - 460420 | 16221.8 |
| nicotinate-nucleotide adenylyltransferase | SPO_RS02270 | Q5LW93 | Positive | 460454 - 461095 | 23710.7 |
| dmt family transporter | SPO_RS02275 | Not Available | Negative | 461048 - 461875 | 28703.4 |
| d-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanine-endopeptidase | SPO_RS02280 | P24228 | Positive | 461960 - 463450 | 52856.9 |
Pathways
1183 pathways
Health Effects
No health effects information available for this bacterium.
