Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rrf2 family transcriptional regulator | SPO_RS02185 | Q9R9M8 | Positive | 447721 - 448167 | 16190.8 |
| abc transporter permease | SPO_RS02190 | Not Available | Negative | 448191 - 450707 | 87416.9 |
| abc transporter atp-binding protein | SPO_RS02195 | Q9A6Z7 | Negative | 450704 - 451399 | 24393.3 |
| arylesterase | SPO_RS02200 | Q9HZY8 | Positive | 451448 - 452083 | 21415.0 |
| sos response-associated peptidase | SPO_RS02205 | Not Available | Positive | 452085 - 452702 | 22602.2 |
| cold-shock protein | SPO_RS02210 | Not Available | Negative | 452742 - 452948 | 7341.73 |
| l,d-transpeptidase | SPO_RS02215 | P0AAY0 | Negative | 453151 - 453708 | 20733.9 |
| hypothetical protein | SPO_RS02220 | Not Available | Negative | 453771 - 454187 | 15031.7 |
| acyl-coa thioesterase | SPO_RS02225 | P0A1A2 | Positive | 454284 - 454676 | 13846.8 |
| hypothetical protein | SPO_RS02230 | Not Available | Positive | 454823 - 455152 | 11363.1 |
Pathways
1183 pathways
Health Effects
No health effects information available for this bacterium.
