Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phasin family protein | SPO_RS02085 | Not Available | Negative | 423669 - 424118 | 16815.6 |
| plp-dependent aspartate aminotransferase family protein | SPO_RS02090 | P66876 | Negative | 424229 - 425440 | 42441.0 |
| m3 family metallopeptidase | SPO_RS02095 | P24171 | Positive | 425562 - 427577 | 73778.9 |
| glyoxylate/hydroxypyruvate reductase a | SPO_RS02100 | A8GD46 | Negative | 427642 - 428574 | 33916.7 |
| rod shape-determining protein roda | SPO_RS02105 | P44468 | Negative | 428594 - 429733 | 41208.6 |
| penicillin-binding protein 2 | SPO_RS02110 | P44469 | Negative | 429730 - 431676 | 71416.6 |
| hypothetical protein | SPO_RS02115 | Not Available | Negative | 431678 - 432214 | 19280.3 |
| rod shape-determining protein mrec | SPO_RS02120 | Q70AN6 | Negative | 432207 - 433124 | 33326.0 |
| rod shape-determining protein | SPO_RS02125 | A0A0H3C7V4 | Negative | 433204 - 434250 | 36928.9 |
| 23s rrna (adenine(2030)-n(6))-methyltransferase rlmj | SPO_RS02130 | P37634 | Positive | 434416 - 435201 | 28897.1 |
Pathways
1183 pathways
Health Effects
No health effects information available for this bacterium.
