Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tryptophan--trna ligase | SPO_RS01985 | P67586 | Negative | 404139 - 405155 | 37469.1 |
| rhomboid family intramembrane serine protease | SPO_RS01990 | Not Available | Positive | 405241 - 405927 | 24434.4 |
| duf2892 domain-containing protein | SPO_RS01995 | Not Available | Negative | 405948 - 406139 | 6690.68 |
| crp/fnr family transcriptional regulator | SPO_RS02000 | Not Available | Negative | 406211 - 406795 | 21215.4 |
| murein biosynthesis integral membrane protein murj | SPO_RS02005 | O05467 | Negative | 406792 - 408333 | 55178.9 |
| [protein-pii] uridylyltransferase | SPO_RS02010 | Q5LWE5 | Negative | 408330 - 411107 | 104356.0 |
| penicillin-binding protein activator | SPO_RS02015 | Not Available | Negative | 411124 - 412299 | 39393.9 |
| 16s rrna (cytidine(1402)-2'-o)-methyltransferase | SPO_RS02020 | Q98DM9 | Positive | 412384 - 413241 | 30305.6 |
| yran family protein | SPO_RS02025 | Q5LWE2 | Positive | 413243 - 413614 | 13736.3 |
| glutathione synthase | SPO_RS02030 | Q8FXW6 | Positive | 413677 - 414609 | 34652.5 |
Pathways
1183 pathways
Health Effects
No health effects information available for this bacterium.
