Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| murein transglycosylase a | SPO_RS19720 | Not Available | Negative | 4100240 - 4101280 | 37932.3 |
| tim44/tima family putative adaptor protein | SPO_RS19725 | Not Available | Negative | 4101277 - 4101933 | 24249.8 |
| fxsa family protein | SPO_RS19730 | O32064 | Positive | 4102043 - 4102534 | 17915.1 |
| protein-export chaperone secb | SPO_RS19735 | Q5LLN4 | Positive | 4102589 - 4103086 | 18549.2 |
| dna polymerase iii subunit epsilon | SPO_RS19740 | Q1RJM1 | Negative | 4103111 - 4103836 | 26709.8 |
| dephospho-coa kinase | SPO_RS19745 | Q5LLN2 | Negative | 4103829 - 4104422 | 21359.6 |
| shikimate dehydrogenase | SPO_RS19750 | Q1GCM4 | Negative | 4104419 - 4105252 | 29636.8 |
| nucleoside triphosphate pyrophosphatase | SPO_RS19755 | Q5LLN0 | Negative | 4105249 - 4105848 | 21817.4 |
| copd family protein | SPO_RS19760 | Q53229 | Positive | 4106261 - 4106710 | 17368.0 |
| transcription termination factor rho | SPO_RS19765 | P52156 | Positive | 4106836 - 4108107 | 47283.9 |
Pathways
1183 pathways
Health Effects
No health effects information available for this bacterium.
