Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sco family protein | SPO_RS19620 | Q52720 | Negative | 4078890 - 4079510 | 22523.4 |
| sensor histidine kinase regb | SPO_RS19625 | P0C0Z0 | Positive | 4079598 - 4080995 | 51374.7 |
| pas-domain containing protein | SPO_RS19630 | Not Available | Positive | 4081063 - 4082565 | 55417.6 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsae | SPO_RS19635 | Q1RGZ7 | Positive | 4082608 - 4083081 | 17352.6 |
| aminoglycoside phosphotransferase family protein | SPO_RS19640 | Q9A2M2 | Positive | 4083078 - 4084085 | 37118.4 |
| nucleotidyltransferase family protein | SPO_RS19645 | Q9A2M1 | Positive | 4084082 - 4084768 | 24225.4 |
| double-strand break repair protein addb | SPO_RS19650 | Not Available | Positive | 4084761 - 4087688 | 107370.0 |
| double-strand break repair helicase adda | SPO_RS19655 | Q5L263 | Positive | 4087685 - 4091041 | 122226.0 |
| thioredoxin | SPO_RS19660 | P08058 | Positive | 4091102 - 4091422 | 11151.2 |
| lin0512 family protein | SPO_RS19665 | Not Available | Positive | 4091510 - 4091860 | 12450.0 |
Pathways
1183 pathways
Health Effects
No health effects information available for this bacterium.
