Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | SPO_RS19520 | P36879 | Positive | 4062230 - 4063159 | 33548.5 |
| sterol desaturase family protein | SPO_RS19525 | Q9EQS5 | Negative | 4063143 - 4063925 | 30426.0 |
| duf1203 domain-containing protein | SPO_RS19530 | Not Available | Negative | 4063986 - 4064453 | 16811.9 |
| i78 family peptidase inhibitor | SPO_RS19535 | Not Available | Negative | 4064528 - 4064806 | 9836.74 |
| s-(hydroxymethyl)glutathione dehydrogenase/class iii alcohol dehydrogenase | SPO_RS19540 | P72324 | Positive | 4064938 - 4066050 | 39134.4 |
| heme biosynthesis protein hemy | SPO_RS19545 | Not Available | Negative | 4066150 - 4067643 | 53827.7 |
| hypothetical protein | SPO_RS19550 | Not Available | Negative | 4067654 - 4068958 | 43972.7 |
| uroporphyrinogen-iii synthase | SPO_RS19555 | Not Available | Negative | 4069012 - 4069725 | 25056.4 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsad | SPO_RS19560 | Q5LLR7 | Positive | 4069824 - 4070921 | 37897.6 |
| nad(p)h-dependent glycerol-3-phosphate dehydrogenase | SPO_RS19565 | Q5LLR6 | Positive | 4070918 - 4071880 | 33417.7 |
Pathways
1183 pathways
Health Effects
No health effects information available for this bacterium.
