Ruegeria pomeroyi DSS-3

Gram-negativeBacilliMotileAerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Ruegeria

Description

Ruegeria pomeroyi DSS-3 is a Gram-negative, aerobic bacterium characterized by its bacilli shape and mobility. It is a heterotrophic organism that thrives in aquatic environments. The strain DSS-3 is mesophilic, indicating it prefers moderate temperature ranges for growth. This bacterium is notable for being free-living, which means it does not rely on a host organism for survival. With a single replicon, Ruegeria pomeroyi DSS-3 can efficiently manage its genetic information, contributing to its adaptability in various aquatic habitats. The strain is cataloged under the accession number NC_003911.12. The ecological relevance of Ruegeria pomeroyi DSS-3 lies in its role in marine ecosystems. As a heterotroph, it contributes to the cycling of organic matter in aquatic environments, potentially influencing nutrient dynamics and the overall health of marine ecosystems. Its mobility may also play a significant role in its ability to colonize different niches within these habitats, further enhancing its ecological impact.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusRuegeria
SpeciesRuegeria pomeroyi
StrainDSS-3

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Ruegeria pomeroyi DSS-3, complete sequence.

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abc transporter atp-binding proteinSPO_RS19520P36879Positive4062230 - 406315933548.5
sterol desaturase family proteinSPO_RS19525Q9EQS5Negative4063143 - 406392530426.0
duf1203 domain-containing proteinSPO_RS19530Not AvailableNegative4063986 - 406445316811.9
i78 family peptidase inhibitorSPO_RS19535Not AvailableNegative4064528 - 40648069836.74
s-(hydroxymethyl)glutathione dehydrogenase/class iii alcohol dehydrogenaseSPO_RS19540P72324Positive4064938 - 406605039134.4
heme biosynthesis protein hemySPO_RS19545Not AvailableNegative4066150 - 406764353827.7
hypothetical proteinSPO_RS19550Not AvailableNegative4067654 - 406895843972.7
uroporphyrinogen-iii synthaseSPO_RS19555Not AvailableNegative4069012 - 406972525056.4
trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsadSPO_RS19560Q5LLR7Positive4069824 - 407092137897.6
nad(p)h-dependent glycerol-3-phosphate dehydrogenaseSPO_RS19565Q5LLR6Positive4070918 - 407188033417.7

Displaying genes 3951 – 3960 of 4001 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.