Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna pseudouridine(55) synthase trub | SPO_RS19470 | Q5LLT4 | Positive | 4052830 - 4053741 | 32828.1 |
| duf1643 domain-containing protein | SPO_RS19475 | Not Available | Positive | 4053787 - 4054293 | 18626.0 |
| calcium-binding protein | SPO_RS23445 | Not Available | Positive | 4054392 - 4055423 | 34808.0 |
| 30s ribosomal protein s15 | SPO_RS19485 | Q5LLT1 | Positive | 4055578 - 4055847 | 10253.5 |
| tetr/acrr family transcriptional regulator | SPO_RS19490 | Not Available | Negative | 4055932 - 4056549 | 23023.7 |
| iron exporter mbfa | SPO_RS19495 | Not Available | Positive | 4056680 - 4057654 | 35330.0 |
| aec family transporter | SPO_RS19500 | Not Available | Positive | 4057693 - 4058622 | 32461.9 |
| dna polymerase i | SPO_RS19505 | Q9S1G2 | Positive | 4058737 - 4061538 | 102708.0 |
| duf2798 domain-containing protein | SPO_RS19510 | Not Available | Negative | 4061594 - 4061824 | 8075.46 |
| zinc-finger domain-containing protein | SPO_RS19515 | Not Available | Negative | 4061959 - 4062138 | 6437.67 |
Pathways
1183 pathways
Health Effects
No health effects information available for this bacterium.
