Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SPO_RS23230 | Not Available | Negative | 4022082 - 4022570 | 18015.2 |
| helix-turn-helix transcriptional regulator | SPO_RS23235 | P96683 | Negative | 4022555 - 4023250 | 25119.4 |
| cytochrome c | SPO_RS19330 | Not Available | Positive | 4023398 - 4023892 | 18620.8 |
| 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | SPO_RS19335 | Q5LLW1 | Positive | 4023978 - 4025495 | 53916.2 |
| murein hydrolase activator envc | SPO_RS19340 | Not Available | Positive | 4025492 - 4026628 | 39535.1 |
| s41 family peptidase | SPO_RS19345 | Q44879 | Positive | 4026635 - 4027966 | 47381.8 |
| hypothetical protein | SPO_RS19350 | Not Available | Negative | 4028060 - 4028437 | 13894.5 |
| duf6478 family protein | SPO_RS19355 | Not Available | Negative | 4028449 - 4029210 | 29394.6 |
| abc transporter transmembrane domain-containing protein | SPO_RS19360 | Not Available | Positive | 4029461 - 4032577 | 115936.0 |
| cpbp family intramembrane glutamic endopeptidase | SPO_RS19365 | Not Available | Positive | 4032570 - 4033460 | 32040.3 |
Pathways
1183 pathways
Health Effects
No health effects information available for this bacterium.
