Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-54-dependent fis family transcriptional regulator | SPO_RS19225 | P28614 | Negative | 4001089 - 4002822 | 63118.0 |
| carboxymuconolactone decarboxylase family protein | SPO_RS19230 | P27749 | Negative | 4003163 - 4003495 | 11764.4 |
| acetoin dehydrogenase dihydrolipoyllysine-residue acetyltransferase subunit | SPO_RS19235 | P27747 | Negative | 4003563 - 4004663 | 38780.2 |
| alpha-ketoacid dehydrogenase subunit beta | SPO_RS19240 | P27746 | Negative | 4004668 - 4005675 | 35735.1 |
| thiamine pyrophosphate-dependent dehydrogenase e1 component subunit alpha | SPO_RS19245 | P27745 | Negative | 4005706 - 4006686 | 34665.2 |
| atp-nad kinase family protein | SPO_RS19250 | P27748 | Negative | 4006683 - 4007741 | 37910.8 |
| duf779 domain-containing protein | SPO_RS22635 | Not Available | Negative | 4007894 - 4008112 | 8017.45 |
| rna polymerase sigma-54 factor | SPO_RS19255 | P22881 | Positive | 4008382 - 4009665 | 47656.0 |
| Trna-met | Not Available | Not Available | Positive | 4010285 - 4010361 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 4010405 - 4010519 | Not Available |
Pathways
1183 pathways
Health Effects
No health effects information available for this bacterium.
