Ruegeria pomeroyi DSS-3

Gram-negativeBacilliMotileAerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Ruegeria

Description

Ruegeria pomeroyi DSS-3 is a Gram-negative, aerobic bacterium characterized by its bacilli shape and mobility. It is a heterotrophic organism that thrives in aquatic environments. The strain DSS-3 is mesophilic, indicating it prefers moderate temperature ranges for growth. This bacterium is notable for being free-living, which means it does not rely on a host organism for survival. With a single replicon, Ruegeria pomeroyi DSS-3 can efficiently manage its genetic information, contributing to its adaptability in various aquatic habitats. The strain is cataloged under the accession number NC_003911.12. The ecological relevance of Ruegeria pomeroyi DSS-3 lies in its role in marine ecosystems. As a heterotroph, it contributes to the cycling of organic matter in aquatic environments, potentially influencing nutrient dynamics and the overall health of marine ecosystems. Its mobility may also play a significant role in its ability to colonize different niches within these habitats, further enhancing its ecological impact.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusRuegeria
SpeciesRuegeria pomeroyi
StrainDSS-3

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Ruegeria pomeroyi DSS-3, complete sequence.

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
class ii aldolase and adducin n-terminal domain-containing proteinSPO_RS19025Not AvailablePositive3960500 - 396125528102.3
sterol desaturase family proteinSPO_RS19030A0A0E0SNE8Positive3961334 - 396232339243.2
7-cyano-7-deazaguanine synthase quecSPO_RS19035Q5LM13Positive3962495 - 396318724909.4
6-carboxytetrahydropterin synthase quedSPO_RS19040P65871Positive3963187 - 396354313866.3
7-carboxy-7-deazaguanine synthase queeSPO_RS19045A9CF16Positive3963540 - 396425926265.3
preq(1) synthaseSPO_RS19050Q5LM10Positive3964281 - 396474817177.4
class i sam-dependent methyltransferaseSPO_RS19055Not AvailableNegative3964759 - 396539122515.6
sdr family oxidoreductaseSPO_RS19060Not AvailablePositive3965480 - 396633130746.6
ompa family proteinSPO_RS19065Not AvailableNegative3966757 - 396767132419.0
peroxidase-related enzymeSPO_RS19070Not AvailableNegative3967668 - 396824021160.6

Displaying genes 3851 – 3860 of 4001 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.