Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-mercaptopyruvate sulfurtransferase | SPO_RS18875 | O64530 | Positive | 3931362 - 3932216 | 31038.0 |
| amino acid aminotransferase | SPO_RS18880 | P95468 | Positive | 3932216 - 3933400 | 42945.8 |
| hypothetical protein | SPO_RS18885 | Not Available | Negative | 3933453 - 3934094 | 23947.0 |
| rrf2 family transcriptional regulator | SPO_RS18890 | Q55433 | Negative | 3934091 - 3934609 | 19031.9 |
| ammonium transporter | SPO_RS18895 | P54147 | Negative | 3934716 - 3936044 | 46721.6 |
| p-ii family nitrogen regulator | SPO_RS18900 | P11671 | Negative | 3936080 - 3936418 | 12323.0 |
| transglycosylase domain-containing protein | SPO_RS18905 | Q9KUC0 | Positive | 3936674 - 3938818 | 76664.7 |
| phospholipid-binding protein mlac | SPO_RS18910 | Not Available | Negative | 3938841 - 3939449 | 22153.0 |
| vacj family lipoprotein | SPO_RS18915 | Q4UND1 | Negative | 3939439 - 3940245 | 29301.3 |
| type i secretion system permease/atpase | SPO_RS18920 | Q03024 | Positive | 3940444 - 3942177 | 62530.7 |
Pathways
1183 pathways
Health Effects
No health effects information available for this bacterium.
