Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aromatic ring-hydroxylating dioxygenase subunit alpha | SPO_RS18675 | Not Available | Negative | 3889517 - 3890659 | 42589.5 |
| nad(p)/fad-dependent oxidoreductase | SPO_RS18680 | Q5L2G3 | Positive | 3890868 - 3892118 | 45551.6 |
| Trna-arg | Not Available | Not Available | Positive | 3892517 - 3892593 | Not Available |
| laci family dna-binding transcriptional regulator | SPO_RS18690 | Q9I1F6 | Positive | 3892710 - 3893735 | 37386.4 |
| winged helix-turn-helix domain-containing protein | SPO_RS18695 | P75843 | Positive | 3893740 - 3894954 | 46443.4 |
| hpch/hpai aldolase/citrate lyase family protein | SPO_RS18700 | A8A876 | Negative | 3895045 - 3895815 | 27115.6 |
| pyridoxal-dependent decarboxylase | SPO_RS18705 | P17770 | Negative | 3895880 - 3897289 | 52722.8 |
| 3,4-dihydroxyphenylacetate 2,3-dioxygenase | SPO_RS18710 | P31003 | Negative | 3897311 - 3898291 | 37365.4 |
| homoprotocatechuate degradation operon regulator hpar | SPO_RS18715 | P0DPR8 | Positive | 3898438 - 3898875 | 16301.8 |
| cupin domain-containing protein | SPO_RS18720 | O86041 | Positive | 3899360 - 3900394 | 37775.0 |
Pathways
1183 pathways
Health Effects
No health effects information available for this bacterium.
