Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SPO_RS18605 | Not Available | Positive | 3875372 - 3875848 | 17366.5 |
| type i secretion target repeat-containing protein | SPO_RS22625 | Not Available | Negative | 3876045 - 3882539 | 225017.0 |
| hypothetical protein | SPO_RS22970 | Not Available | Negative | 3882523 - 3882930 | 15108.5 |
| is5-like element isspo7 family transposase | SPO_RS22630 | Not Available | Positive | 3883164 - 3883921 | 28819.2 |
| d-ala-d-ala carboxypeptidase family metallohydrolase | SPO_RS18645 | Not Available | Positive | 3884090 - 3884746 | 23776.3 |
| acetylornithine deacetylase | SPO_RS18650 | Q3YV19 | Negative | 3885153 - 3886298 | 41760.9 |
| lysr family transcriptional regulator | SPO_RS18655 | Q9L127 | Negative | 3886295 - 3887230 | 34024.3 |
| aromatic ring-hydroxylating dioxygenase subunit alpha | SPO_RS18660 | P0A110 | Negative | 3887285 - 3888394 | 41710.3 |
| duf1028 domain-containing protein | SPO_RS18665 | Not Available | Negative | 3888420 - 3889094 | 23018.3 |
| rida family protein | SPO_RS18670 | Not Available | Negative | 3889099 - 3889515 | 15505.5 |
Pathways
1183 pathways
Health Effects
No health effects information available for this bacterium.
