Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxygen-dependent coproporphyrinogen oxidase | SPO_RS18515 | Q89SC2 | Negative | 3855754 - 3856638 | 32866.6 |
| sdr family nad(p)-dependent oxidoreductase | SPO_RS18520 | P9WGQ4 | Negative | 3856650 - 3857450 | 28150.6 |
| class i sam-dependent methyltransferase | SPO_RS18525 | Q57G51 | Negative | 3857488 - 3858453 | 34456.8 |
| atp-dependent clp protease adapter clps | SPO_RS18530 | Q5LMA7 | Negative | 3858499 - 3858840 | 13119.0 |
| had family hydrolase | SPO_RS18535 | Not Available | Positive | 3858931 - 3859632 | 25818.8 |
| d-alanyl-d-alanine carboxypeptidase family protein | SPO_RS18540 | P38422 | Positive | 3859957 - 3861324 | 48964.4 |
| lamb/ycsf family protein | SPO_RS18545 | Q5LMA4 | Negative | 3861396 - 3862157 | 27007.6 |
| biotin-dependent carboxyltransferase family protein | SPO_RS18550 | P75745 | Negative | 3862168 - 3863166 | 34763.6 |
| allophanate hydrolase subunit 1 | SPO_RS18555 | Not Available | Negative | 3863163 - 3863912 | 27073.5 |
| hypothetical protein | SPO_RS18560 | Not Available | Negative | 3863899 - 3864819 | 32424.2 |
Pathways
1183 pathways
Health Effects
No health effects information available for this bacterium.
