Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lyse family translocator | SPO_RS18310 | Not Available | Positive | 3818265 - 3818861 | 21330.7 |
| gyri-like domain-containing protein | SPO_RS18315 | Not Available | Negative | 3819346 - 3820176 | 30632.4 |
| acetyl-coa carboxylase carboxyltransferase subunit alpha | SPO_RS18320 | Q5LME7 | Positive | 3820299 - 3821261 | 34703.8 |
| lytic murein transglycosylase | SPO_RS18325 | P41052 | Negative | 3821349 - 3822506 | 40848.0 |
| abc transporter permease | SPO_RS18330 | P75851 | Negative | 3822549 - 3823337 | 27762.9 |
| abc transporter atp-binding protein | SPO_RS18335 | Q57855 | Negative | 3823330 - 3824097 | 27829.8 |
| abc transporter substrate-binding protein | SPO_RS18340 | Not Available | Negative | 3824104 - 3825117 | 35138.0 |
| gntr family transcriptional regulator | SPO_RS18345 | Not Available | Negative | 3825190 - 3825837 | 23865.3 |
| m48 family metallopeptidase | SPO_RS18350 | Not Available | Negative | 3825868 - 3826563 | 26075.4 |
| tigr02300 family protein | SPO_RS18355 | Not Available | Positive | 3826664 - 3826990 | 12103.6 |
Pathways
1183 pathways
Health Effects
No health effects information available for this bacterium.
