Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| paai family thioesterase | SPO_RS18255 | Not Available | Negative | 3809675 - 3810130 | 16485.8 |
| d-amino-acid transaminase | SPO_RS18260 | P63511 | Negative | 3810295 - 3811155 | 31684.0 |
| duf6544 family protein | SPO_RS18265 | Not Available | Negative | 3811206 - 3812051 | 31100.5 |
| n-acetyl-d-glu racemase dgca | SPO_RS18270 | P51981 | Negative | 3812070 - 3813035 | 34086.8 |
| n-acetyltransferase dgcn | SPO_RS18275 | Not Available | Negative | 3813128 - 3814129 | 35579.1 |
| l-malyl-coa/beta-methylmalyl-coa lyase | SPO_RS18280 | A3PGR7 | Positive | 3814426 - 3815388 | 34209.7 |
| sdr family oxidoreductase | SPO_RS18290 | A0A1L5BUG8 | Negative | 3815434 - 3816186 | 25560.7 |
| hypothetical protein | SPO_RS23355 | Not Available | Positive | 3816360 - 3816980 | 21162.6 |
| pa14 domain-containing protein | SPO_RS18300 | Not Available | Negative | 3817029 - 3817610 | 20918.1 |
| lrp/asnc family transcriptional regulator | SPO_RS18305 | P0ACJ2 | Negative | 3817740 - 3818192 | 16430.9 |
Pathways
1183 pathways
Health Effects
No health effects information available for this bacterium.
