Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phenylalanine--trna ligase subunit alpha | SPO_RS18205 | Q5LMG9 | Negative | 3801668 - 3802741 | 39787.5 |
| helix-turn-helix domain-containing protein | SPO_RS18210 | Not Available | Negative | 3802847 - 3803614 | 28183.5 |
| pyridoxamine 5'-phosphate oxidase family protein | SPO_RS18215 | Not Available | Positive | 3803686 - 3804288 | 22370.6 |
| fad-dependent oxidoreductase | SPO_RS18220 | Q6Z690 | Positive | 3804455 - 3805801 | 47708.6 |
| 50s ribosomal protein l20 | SPO_RS18225 | Q5LMG5 | Negative | 3805956 - 3806321 | 13404.2 |
| 50s ribosomal protein l35 | SPO_RS18230 | Q5LMG4 | Negative | 3806337 - 3806537 | 7332.2 |
| hypothetical protein | SPO_RS18235 | Not Available | Negative | 3806668 - 3806892 | 7834.86 |
| pyruvate kinase | SPO_RS18240 | O05118 | Negative | 3806920 - 3808365 | 51310.0 |
| n-formylglutamate amidohydrolase | SPO_RS18245 | Not Available | Positive | 3808483 - 3809220 | 27126.4 |
| duf1244 domain-containing protein | SPO_RS18250 | Not Available | Positive | 3809348 - 3809662 | 12193.4 |
Pathways
1183 pathways
Health Effects
No health effects information available for this bacterium.
