Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| neutral zinc metallopeptidase | SPO_RS17965 | P64431 | Negative | 3756937 - 3757788 | 30592.1 |
| hypothetical protein | SPO_RS17970 | Not Available | Positive | 3758190 - 3758588 | 13874.5 |
| protein-tyrosine phosphatase family protein | SPO_RS17975 | Not Available | Negative | 3758593 - 3759090 | 17340.0 |
| hypothetical protein | SPO_RS17980 | Not Available | Negative | 3759225 - 3759740 | 17842.4 |
| dna polymerase iii subunit gamma/tau | SPO_RS17985 | P74876 | Positive | 3759921 - 3761672 | 63107.7 |
| n-acetyltransferase | SPO_RS17990 | Not Available | Negative | 3761752 - 3762225 | 16931.7 |
| fad-binding oxidoreductase | SPO_RS17995 | Not Available | Negative | 3762222 - 3763265 | 36680.8 |
| trna (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase mnmd | SPO_RS18000 | A8GH77 | Positive | 3763315 - 3763980 | 24174.6 |
| dmt family transporter | SPO_RS18005 | Not Available | Positive | 3763977 - 3764873 | 32380.3 |
| lytic transglycosylase domain-containing protein | SPO_RS18010 | P44888 | Negative | 3764829 - 3766811 | 72448.7 |
Pathways
1183 pathways
Health Effects
No health effects information available for this bacterium.
