Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lytic murein transglycosylase | SPO_RS17665 | Not Available | Positive | 3691674 - 3692945 | 46001.6 |
| phenylalanine--trna ligase subunit beta | SPO_RS17670 | Q5LMS3 | Positive | 3693080 - 3695476 | 85745.4 |
| lysr family transcriptional regulator | SPO_RS17675 | Q05840 | Negative | 3695531 - 3696406 | 32132.8 |
| class i sam-dependent methyltransferase | SPO_RS17680 | Not Available | Positive | 3696500 - 3697132 | 22870.6 |
| ytoq family protein | SPO_RS17685 | O34305 | Positive | 3697200 - 3697649 | 15884.9 |
| cynx/nimt family mfs transporter | SPO_RS17690 | Not Available | Positive | 3697724 - 3698881 | 40447.0 |
| glutathione s-transferase family protein | SPO_RS17695 | P77526 | Negative | 3698888 - 3699589 | 25779.0 |
| large conductance mechanosensitive channel protein mscl | SPO_RS17700 | Q5LMR7 | Positive | 3699879 - 3700310 | 15050.4 |
| mechanosensitive ion channel family protein | SPO_RS17705 | O52401 | Positive | 3700398 - 3701204 | 28932.0 |
| Trna-met | Not Available | Not Available | Positive | 3701365 - 3701441 | Not Available |
Pathways
1183 pathways
Health Effects
No health effects information available for this bacterium.
