Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad-linked oxidase c-terminal domain-containing protein | SPO_RS17615 | P0AEQ0 | Positive | 3682017 - 3683465 | 51535.1 |
| fad-binding protein | SPO_RS17620 | P52073 | Positive | 3683534 - 3684619 | 37669.4 |
| glycolate oxidase subunit glcf | SPO_RS17625 | P52074 | Positive | 3684623 - 3685945 | 48177.7 |
| ybfb/yjij family mfs transporter | SPO_RS17630 | Not Available | Negative | 3686005 - 3687174 | 40524.4 |
| serine protease | SPO_RS17635 | Not Available | Positive | 3687383 - 3688195 | 28701.2 |
| serine protease | SPO_RS17640 | Not Available | Positive | 3688192 - 3689010 | 28445.0 |
| hsp20 family protein | SPO_RS17645 | O86110 | Positive | 3689137 - 3689607 | 17336.6 |
| duf1801 domain-containing protein | SPO_RS17650 | Not Available | Negative | 3689749 - 3690141 | 14669.9 |
| glutathione s-transferase family protein | SPO_RS17655 | Not Available | Negative | 3690138 - 3690836 | 26270.7 |
| yafy family protein | SPO_RS17660 | Not Available | Positive | 3690920 - 3691609 | 25234.6 |
Pathways
1183 pathways
Health Effects
No health effects information available for this bacterium.
