Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | SPO_RS17565 | Not Available | Negative | 3671378 - 3672505 | 41926.2 |
| polyamine abc transporter substrate-binding protein | SPO_RS17570 | Not Available | Negative | 3672587 - 3673672 | 39875.9 |
| gntr family transcriptional regulator | SPO_RS17575 | P76114 | Positive | 3673819 - 3674499 | 24811.0 |
| aspartate aminotransferase family protein | SPO_RS17580 | Q9I6J2 | Positive | 3674576 - 3675970 | 50688.6 |
| abc transporter atp-binding protein | SPO_RS17585 | Q1AS06 | Positive | 3676175 - 3677275 | 40931.4 |
| abc transporter substrate-binding protein | SPO_RS17590 | Q9I6R6 | Positive | 3677391 - 3678464 | 38123.7 |
| abc transporter permease | SPO_RS17595 | P0A2J8 | Positive | 3678535 - 3679818 | 47175.3 |
| abc transporter permease | SPO_RS17600 | Not Available | Positive | 3679825 - 3680745 | 33619.8 |
| hypothetical protein | SPO_RS17605 | Not Available | Negative | 3680830 - 3681177 | 12922.5 |
| duf599 domain-containing protein | SPO_RS17610 | Not Available | Negative | 3681213 - 3681935 | 26184.2 |
Pathways
1183 pathways
Health Effects
No health effects information available for this bacterium.
