Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| stf0 sulfotransferase family protein | SPO_RS17315 | Not Available | Negative | 3624048 - 3624815 | 28379.5 |
| trm112 family protein | SPO_RS17320 | Q5LMZ1 | Negative | 3624808 - 3624996 | 6742.15 |
| lon peptidase substrate-binding domain-containing protein | SPO_RS17325 | Not Available | Negative | 3624993 - 3625637 | 24286.3 |
| thioredoxin | SPO_RS17330 | Q9CM49 | Negative | 3625665 - 3626579 | 31846.6 |
| leucine-rich repeat domain-containing protein | SPO_RS22315 | Not Available | Negative | 3626662 - 3628332 | 60247.1 |
| exodeoxyribonuclease iii | SPO_RS17340 | Not Available | Negative | 3628501 - 3629289 | 29629.0 |
| response regulator transcription factor | SPO_RS17345 | P37478 | Negative | 3629488 - 3630174 | 25877.0 |
| gtp cyclohydrolase ii | SPO_RS17350 | P43525 | Positive | 3630341 - 3631432 | 38976.1 |
| l,d-transpeptidase | SPO_RS17355 | Not Available | Positive | 3631429 - 3631929 | 18775.5 |
| yggs family pyridoxal phosphate-dependent enzyme | SPO_RS17360 | O66631 | Negative | 3631913 - 3632572 | 23622.6 |
Pathways
1183 pathways
Health Effects
No health effects information available for this bacterium.
