Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ethd family reductase | SPO_RS01610 | Not Available | Negative | 326374 - 326682 | 10909.0 |
| electron transfer flavoprotein-ubiquinone oxidoreductase | SPO_RS01615 | Q9HZP5 | Positive | 326914 - 328560 | 59395.1 |
| tetratricopeptide repeat protein | SPO_RS01620 | Not Available | Positive | 328729 - 330441 | 61842.3 |
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | SPO_RS01625 | Q5LX98 | Positive | 330431 - 331270 | 29116.2 |
| polyprenyl synthetase family protein | SPO_RS01630 | P0AD57 | Negative | 331351 - 332349 | 35998.1 |
| duf2007 domain-containing protein | SPO_RS01635 | Not Available | Positive | 332406 - 332621 | 8051.77 |
| trna1(val) (adenine(37)-n6)-methyltransferase | SPO_RS01640 | Not Available | Positive | 332618 - 333391 | 27327.8 |
| ydch family protein | SPO_RS22380 | Not Available | Positive | 333505 - 333669 | 6155.48 |
| dmt family transporter | SPO_RS01645 | D7A5Q8 | Negative | 333666 - 334532 | 29665.0 |
| transcriptional regulator gcva | SPO_RS01650 | Not Available | Negative | 334529 - 335476 | 34769.9 |
Pathways
1183 pathways
Health Effects
No health effects information available for this bacterium.
