Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pitrilysin family protein | SPO_RS17075 | P55679 | Negative | 3573049 - 3574392 | 49323.2 |
| duf3035 domain-containing protein | SPO_RS17080 | Not Available | Negative | 3574471 - 3574989 | 18241.5 |
| signal peptidase ii | SPO_RS17085 | Q8YNI8 | Negative | 3575040 - 3575513 | 17383.6 |
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase | SPO_RS17090 | Q5LN38 | Negative | 3575513 - 3577102 | 55780.6 |
| heparinase ii/iii family protein | SPO_RS17095 | Not Available | Negative | 3577125 - 3578846 | 62632.5 |
| rsmb/nop family class i sam-dependent rna methyltransferase | SPO_RS17100 | Q9KVU5 | Negative | 3578934 - 3580205 | 44874.0 |
| duf1674 domain-containing protein | SPO_RS17105 | Not Available | Positive | 3580300 - 3580482 | 6685.83 |
| benzoate/h(+) symporter bene family transporter | SPO_RS17110 | P76103 | Positive | 3580570 - 3581742 | 39517.2 |
| lysr family transcriptional regulator | SPO_RS17115 | P24734 | Negative | 3581739 - 3582602 | 31019.5 |
| gamma-butyrobetaine dioxygenase | SPO_RS17120 | Q98KK0 | Positive | 3582703 - 3583839 | 41144.4 |
Pathways
1183 pathways
Health Effects
No health effects information available for this bacterium.
