Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| threonine/serine dehydratase | SPO_RS16925 | Q10725 | Negative | 3542560 - 3543480 | 30889.9 |
| log family protein | SPO_RS16930 | Not Available | Positive | 3543569 - 3544411 | 31523.7 |
| hypothetical protein | SPO_RS16935 | Not Available | Negative | 3544427 - 3544636 | 7506.21 |
| cystathionine gamma-lyase | SPO_RS16940 | Q59829 | Positive | 3544874 - 3545989 | 39755.6 |
| phage holin family protein | SPO_RS16945 | Not Available | Negative | 3545992 - 3546375 | 13172.0 |
| 23s rrna (adenine(2503)-c(2))-methyltransferase rlmn | SPO_RS16950 | Q5LN66 | Negative | 3546455 - 3547636 | 44162.4 |
| lysozyme inhibitor lpri family protein | SPO_RS16955 | Not Available | Negative | 3547806 - 3548192 | 12969.5 |
| invasion associated locus b family protein | SPO_RS16960 | Not Available | Negative | 3548228 - 3548767 | 18783.2 |
| asparaginase | SPO_RS16965 | Not Available | Positive | 3548949 - 3549947 | 35504.4 |
| ycii family protein | SPO_RS16970 | Not Available | Negative | 3549954 - 3550268 | 10680.6 |
Pathways
1183 pathways
Health Effects
No health effects information available for this bacterium.
