Ruegeria pomeroyi DSS-3

Gram-negativeBacilliMotileAerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Ruegeria

Description

Ruegeria pomeroyi DSS-3 is a Gram-negative, aerobic bacterium characterized by its bacilli shape and mobility. It is a heterotrophic organism that thrives in aquatic environments. The strain DSS-3 is mesophilic, indicating it prefers moderate temperature ranges for growth. This bacterium is notable for being free-living, which means it does not rely on a host organism for survival. With a single replicon, Ruegeria pomeroyi DSS-3 can efficiently manage its genetic information, contributing to its adaptability in various aquatic habitats. The strain is cataloged under the accession number NC_003911.12. The ecological relevance of Ruegeria pomeroyi DSS-3 lies in its role in marine ecosystems. As a heterotroph, it contributes to the cycling of organic matter in aquatic environments, potentially influencing nutrient dynamics and the overall health of marine ecosystems. Its mobility may also play a significant role in its ability to colonize different niches within these habitats, further enhancing its ecological impact.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusRuegeria
SpeciesRuegeria pomeroyi
StrainDSS-3

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Ruegeria pomeroyi DSS-3, complete sequence.

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sgnh/gdsl hydrolase family proteinSPO_RS16725Not AvailableNegative3502015 - 350271025269.1
zn-dependent hydrolaseSPO_RS16730Q9F464Negative3502810 - 350399442396.5
histidine phosphatase family proteinSPO_RS16735Not AvailablePositive3504158 - 350480823963.6
glutathione s-transferase family proteinSPO_RS16740P0A9D3Positive3504818 - 350543222187.9
saccharopine dehydrogenaseSPO_RS16745Q09694Positive3505447 - 350649937089.1
semisweet family sugar transporterSPO_RS16750Q89G85Positive3506499 - 35067478836.18
saccharopine dehydrogenase family proteinSPO_RS16755Q9P4R4Positive3506761 - 350790342043.9
duf3775 domain-containing proteinSPO_RS16760Not AvailableNegative3508014 - 350833111495.6
bifunctional transcriptional activator/dna repair enzyme adaaSPO_RS16765P26189Positive3508494 - 350956739019.0
isocitrate lyase/phosphoenolpyruvate mutase family proteinSPO_RS16770Not AvailablePositive3509564 - 351033126572.9

Displaying genes 3391 – 3400 of 4001 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.