Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SPO_RS16675 | Not Available | Negative | 3492494 - 3492751 | 9166.22 |
| branched-chain amino acid abc transporter permease | SPO_RS16680 | P0A2J2 | Negative | 3492830 - 3493816 | 35163.1 |
| abc transporter atp-binding protein | SPO_RS16685 | Not Available | Negative | 3493858 - 3494676 | 30350.8 |
| amp-binding protein | SPO_RS16690 | Not Available | Negative | 3494770 - 3496743 | 73038.9 |
| pas-domain containing protein | SPO_RS16695 | P14377 | Positive | 3497064 - 3498962 | 68736.7 |
| response regulator transcription factor | SPO_RS16700 | G3XCY6 | Positive | 3498959 - 3499666 | 25928.8 |
| tetr/acrr family transcriptional regulator | SPO_RS16705 | Not Available | Negative | 3499653 - 3500237 | 20849.2 |
| mapeg family protein | SPO_RS16710 | Not Available | Positive | 3500351 - 3500743 | 13841.3 |
| lysr family transcriptional regulator | SPO_RS16715 | P52685 | Negative | 3500753 - 3501634 | 32289.1 |
| duf1330 domain-containing protein | SPO_RS16720 | Not Available | Positive | 3501724 - 3502005 | 9567.39 |
Pathways
1183 pathways
Health Effects
No health effects information available for this bacterium.
