Ruegeria pomeroyi DSS-3

Gram-negativeBacilliMotileAerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Ruegeria

Description

Ruegeria pomeroyi DSS-3 is a Gram-negative, aerobic bacterium characterized by its bacilli shape and mobility. It is a heterotrophic organism that thrives in aquatic environments. The strain DSS-3 is mesophilic, indicating it prefers moderate temperature ranges for growth. This bacterium is notable for being free-living, which means it does not rely on a host organism for survival. With a single replicon, Ruegeria pomeroyi DSS-3 can efficiently manage its genetic information, contributing to its adaptability in various aquatic habitats. The strain is cataloged under the accession number NC_003911.12. The ecological relevance of Ruegeria pomeroyi DSS-3 lies in its role in marine ecosystems. As a heterotroph, it contributes to the cycling of organic matter in aquatic environments, potentially influencing nutrient dynamics and the overall health of marine ecosystems. Its mobility may also play a significant role in its ability to colonize different niches within these habitats, further enhancing its ecological impact.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusRuegeria
SpeciesRuegeria pomeroyi
StrainDSS-3

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Ruegeria pomeroyi DSS-3, complete sequence.

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
30s ribosomal protein s16SPO_RS16475Q5LNF2Positive3454121 - 345448613406.2
5,6-dimethylbenzimidazole synthaseSPO_RS16480Q2RNG5Positive3454549 - 345513321935.3
ribosome maturation factor rimmSPO_RS16485Q5LNF0Positive3455280 - 345578317885.4
50s ribosomal protein l31SPO_RS16490Q5LNE9Negative3456320 - 34565418142.74
50s ribosomal protein l19SPO_RS16495Q5LNE8Negative3456553 - 345693614056.9
gh25 family lysozymeSPO_RS16500P25310Positive3457338 - 345814730581.4
trna (guanosine(37)-n1)-methyltransferase trmdSPO_RS16505Q5LNE6Positive3458189 - 345898929383.2
tylf/mycf/novp-related o-methyltransferaseSPO_RS16510Not AvailablePositive3459049 - 345980428181.6
glutathione s-transferase family proteinSPO_RS16515Not AvailableNegative3459927 - 346058024257.0
marr family winged helix-turn-helix transcriptional regulatorSPO_RS16520Not AvailablePositive3460695 - 346115317041.8

Displaying genes 3341 – 3350 of 4001 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.