Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s16 | SPO_RS16475 | Q5LNF2 | Positive | 3454121 - 3454486 | 13406.2 |
| 5,6-dimethylbenzimidazole synthase | SPO_RS16480 | Q2RNG5 | Positive | 3454549 - 3455133 | 21935.3 |
| ribosome maturation factor rimm | SPO_RS16485 | Q5LNF0 | Positive | 3455280 - 3455783 | 17885.4 |
| 50s ribosomal protein l31 | SPO_RS16490 | Q5LNE9 | Negative | 3456320 - 3456541 | 8142.74 |
| 50s ribosomal protein l19 | SPO_RS16495 | Q5LNE8 | Negative | 3456553 - 3456936 | 14056.9 |
| gh25 family lysozyme | SPO_RS16500 | P25310 | Positive | 3457338 - 3458147 | 30581.4 |
| trna (guanosine(37)-n1)-methyltransferase trmd | SPO_RS16505 | Q5LNE6 | Positive | 3458189 - 3458989 | 29383.2 |
| tylf/mycf/novp-related o-methyltransferase | SPO_RS16510 | Not Available | Positive | 3459049 - 3459804 | 28181.6 |
| glutathione s-transferase family protein | SPO_RS16515 | Not Available | Negative | 3459927 - 3460580 | 24257.0 |
| marr family winged helix-turn-helix transcriptional regulator | SPO_RS16520 | Not Available | Positive | 3460695 - 3461153 | 17041.8 |
Pathways
1183 pathways
Health Effects
No health effects information available for this bacterium.
