Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional (p)ppgpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | SPO_RS16225 | Q8YG65 | Negative | 3413865 - 3415997 | 80051.8 |
| dna-directed rna polymerase subunit omega | SPO_RS16230 | Q5LNK0 | Negative | 3416026 - 3416379 | 13077.3 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | SPO_RS16235 | P72736 | Negative | 3416471 - 3417037 | 20771.1 |
| nyn domain-containing protein | SPO_RS16240 | Q31LZ8 | Positive | 3417176 - 3417748 | 21854.3 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | SPO_RS16245 | Q5LNJ7 | Positive | 3417941 - 3418891 | 34353.4 |
| glutathione s-transferase family protein | SPO_RS16250 | Not Available | Positive | 3418888 - 3419517 | 22742.3 |
| lyse family translocator | SPO_RS16255 | A4WB82 | Positive | 3419584 - 3420198 | 21694.2 |
| duf3429 domain-containing protein | SPO_RS16260 | Not Available | Positive | 3420195 - 3420647 | 15815.9 |
| class i sam-dependent methyltransferase | SPO_RS16265 | Not Available | Positive | 3420644 - 3421237 | 20936.6 |
| ribonuclease hi | SPO_RS16270 | Q5LNJ2 | Positive | 3421230 - 3421697 | 17152.5 |
Pathways
1183 pathways
Health Effects
No health effects information available for this bacterium.
