Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SPO_RS23345 | Not Available | Positive | 3383110 - 3383247 | 5104.3 |
| duf2125 domain-containing protein | SPO_RS16080 | Not Available | Positive | 3383282 - 3384283 | 36262.5 |
| extensin family protein | SPO_RS16085 | Not Available | Negative | 3384299 - 3385159 | 30824.5 |
| prephenate/arogenate dehydrogenase family protein | SPO_RS16090 | Q04983 | Negative | 3385156 - 3386079 | 33203.7 |
| histidinol-phosphate transaminase | SPO_RS16095 | Q5LNM6 | Negative | 3386076 - 3387161 | 38784.3 |
| aminotransferase class v-fold plp-dependent enzyme | SPO_RS16100 | Not Available | Negative | 3387228 - 3388643 | 50170.9 |
| lrp/asnc family transcriptional regulator | SPO_RS16105 | F8DT92 | Positive | 3388749 - 3389207 | 17597.3 |
| ribose 5-phosphate isomerase b | SPO_RS16110 | P37351 | Negative | 3389204 - 3389653 | 15782.9 |
| 30s ribosomal protein s4 | SPO_RS16115 | Q5LNM2 | Negative | 3389781 - 3390401 | 23667.6 |
| hint domain-containing protein | SPO_RS16120 | Not Available | Negative | 3390603 - 3391667 | 39015.8 |
Pathways
1183 pathways
Health Effects
No health effects information available for this bacterium.
