Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| f0f1 atp synthase subunit alpha | SPO_RS16030 | Q5LNN9 | Negative | 3370624 - 3372162 | 54961.9 |
| f0f1 atp synthase subunit delta | SPO_RS16035 | Q5LNN8 | Negative | 3372163 - 3372723 | 19545.8 |
| hypothetical protein | SPO_RS16040 | Not Available | Positive | 3373142 - 3374077 | 34249.3 |
| class i sam-dependent methyltransferase | SPO_RS16045 | P05447 | Negative | 3374086 - 3374838 | 27909.1 |
| hydroxyacylglutathione hydrolase | SPO_RS16050 | Q5LNN5 | Positive | 3374899 - 3375666 | 27514.4 |
| atp-dependent clp protease atp-binding subunit clpa | SPO_RS16055 | P05444 | Positive | 3375841 - 3378168 | 84944.5 |
| m23 family metallopeptidase | SPO_RS16060 | Not Available | Positive | 3378168 - 3379127 | 33640.8 |
| peptidoglycan -binding protein | SPO_RS16065 | Not Available | Negative | 3379130 - 3381430 | 83180.4 |
| hypothetical protein | SPO_RS16070 | Not Available | Negative | 3381434 - 3382615 | 42995.9 |
| gamma-glutamylcyclotransferase | SPO_RS16075 | Not Available | Negative | 3382686 - 3383162 | 17568.8 |
Pathways
1183 pathways
Health Effects
No health effects information available for this bacterium.
