Ruegeria pomeroyi DSS-3

Gram-negativeBacilliMotileAerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Ruegeria

Description

Ruegeria pomeroyi DSS-3 is a Gram-negative, aerobic bacterium characterized by its bacilli shape and mobility. It is a heterotrophic organism that thrives in aquatic environments. The strain DSS-3 is mesophilic, indicating it prefers moderate temperature ranges for growth. This bacterium is notable for being free-living, which means it does not rely on a host organism for survival. With a single replicon, Ruegeria pomeroyi DSS-3 can efficiently manage its genetic information, contributing to its adaptability in various aquatic habitats. The strain is cataloged under the accession number NC_003911.12. The ecological relevance of Ruegeria pomeroyi DSS-3 lies in its role in marine ecosystems. As a heterotroph, it contributes to the cycling of organic matter in aquatic environments, potentially influencing nutrient dynamics and the overall health of marine ecosystems. Its mobility may also play a significant role in its ability to colonize different niches within these habitats, further enhancing its ecological impact.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusRuegeria
SpeciesRuegeria pomeroyi
StrainDSS-3

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Ruegeria pomeroyi DSS-3, complete sequence.

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
mosc domain-containing proteinSPO_RS15730Not AvailableNegative3315131 - 331570620740.8
atp-dependent zinc metalloprotease ftshSPO_RS15735B8H444Negative3315823 - 331773669385.2
trna lysidine(34) synthetase tilsSPO_RS15740Q5LNU7Negative3317815 - 331907445437.8
tol-pal system protein ybgfSPO_RS15745Not AvailableNegative3319065 - 331988028410.3
peptidoglycan-associated lipoprotein palSPO_RS15750Q98F85Negative3319885 - 332039117497.5
tol-pal system beta propeller repeat protein tolbSPO_RS15755Q5LNU4Negative3320483 - 332180247255.7
biopolymer transporter tonbSPO_RS15760Not AvailableNegative3321799 - 332294140374.9
protein tolrSPO_RS15765P50599Negative3322951 - 332343016644.2
protein tolqSPO_RS15770P50598Negative3323434 - 332412925151.3
tol-pal system-associated acyl-coa thioesteraseSPO_RS15775P44679Negative3324237 - 332462014445.4

Displaying genes 3191 – 3200 of 4001 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.