Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heme o synthase | SPO_RS15580 | Q5LNX8 | Negative | 3283421 - 3284377 | 34407.6 |
| cytochrome c oxidase subunit ii | SPO_RS15585 | Q03736 | Negative | 3284465 - 3285301 | 30571.8 |
| metalloprotease tldd | SPO_RS15590 | P0AGG9 | Positive | 3285479 - 3286900 | 49749.0 |
| dna-processing protein dpra | SPO_RS15595 | P39813 | Positive | 3287125 - 3288273 | 40521.0 |
| type i dna topoisomerase | SPO_RS15600 | Q9X3X7 | Positive | 3288437 - 3291079 | 97729.5 |
| tetr/acrr family transcriptional regulator | SPO_RS15605 | Not Available | Negative | 3291101 - 3291682 | 20029.9 |
| voc family protein | SPO_RS15610 | Not Available | Positive | 3291750 - 3292175 | 15390.0 |
| coa transferase subunit a | SPO_RS15615 | B0RVK4 | Positive | 3292308 - 3293012 | 25567.7 |
| 3-oxoacid coa-transferase subunit b | SPO_RS15620 | B0RVK3 | Positive | 3293016 - 3293642 | 22010.7 |
| lytic transglycosylase domain-containing protein | SPO_RS15625 | O31608 | Negative | 3293696 - 3294541 | 29529.5 |
Pathways
1183 pathways
Health Effects
No health effects information available for this bacterium.
