Ruegeria pomeroyi DSS-3

Gram-negativeBacilliMotileAerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Ruegeria

Description

Ruegeria pomeroyi DSS-3 is a Gram-negative, aerobic bacterium characterized by its bacilli shape and mobility. It is a heterotrophic organism that thrives in aquatic environments. The strain DSS-3 is mesophilic, indicating it prefers moderate temperature ranges for growth. This bacterium is notable for being free-living, which means it does not rely on a host organism for survival. With a single replicon, Ruegeria pomeroyi DSS-3 can efficiently manage its genetic information, contributing to its adaptability in various aquatic habitats. The strain is cataloged under the accession number NC_003911.12. The ecological relevance of Ruegeria pomeroyi DSS-3 lies in its role in marine ecosystems. As a heterotroph, it contributes to the cycling of organic matter in aquatic environments, potentially influencing nutrient dynamics and the overall health of marine ecosystems. Its mobility may also play a significant role in its ability to colonize different niches within these habitats, further enhancing its ecological impact.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusRuegeria
SpeciesRuegeria pomeroyi
StrainDSS-3

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Ruegeria pomeroyi DSS-3, complete sequence.

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
methylenetetrahydrofolate reductaseSPO_RS15290P71319Positive3216548 - 321741431315.0
paai family thioesteraseSPO_RS15295Not AvailablePositive3217476 - 321796117018.6
duf2235 domain-containing proteinSPO_RS15300P39992Negative3218165 - 321924140666.9
xanthine dehydrogenase family protein molybdopterin-binding subunitSPO_RS15305P19913Negative3219219 - 322151082284.5
lysr substrate-binding domain-containing proteinSPO_RS23330Not AvailableNegative3221648 - 322328557886.6
phytanoyl-coa dioxygenase family proteinSPO_RS15315Not AvailablePositive3223390 - 322427732501.7
valine--trna ligaseSPO_RS15320Q5LP30Positive3224636 - 3227698113549.0
duf1992 domain-containing proteinSPO_RS15325Not AvailablePositive3227778 - 322811012128.7
alpha/beta fold hydrolaseSPO_RS15330Q9Z3Q0Positive3228183 - 322958051546.4
crotonase/enoyl-coa hydratase family proteinSPO_RS15335Q13011Negative3229754 - 323053627766.7

Displaying genes 3101 – 3110 of 4001 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.