Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna (n(6)-l-threonylcarbamoyladenosine(37)-c(2))- methylthiotransferase mtab | SPO_RS01410 | Q9ZDB6 | Negative | 292631 - 293887 | 46437.8 |
| diaminopimelate epimerase | SPO_RS01415 | Q3IZB6 | Negative | 293884 - 294723 | 30031.9 |
| Trna-lys | Not Available | Not Available | Positive | 294934 - 295009 | Not Available |
| yhs domain-containing (seleno)protein | SPO_RS01425 | Not Available | Negative | 295450 - 295923 | 16843.5 |
| hypothetical protein | SPO_RS01430 | Not Available | Negative | 296104 - 296379 | 9850.03 |
| glycerol-3-phosphate 1-o-acyltransferase plsy | SPO_RS01435 | Q5LX62 | Negative | 296376 - 296987 | 21000.3 |
| dihydroorotase | SPO_RS01440 | C0R5K8 | Negative | 296987 - 298276 | 45710.7 |
| hypothetical protein | SPO_RS01445 | Not Available | Negative | 298273 - 298659 | 13840.9 |
| hypothetical protein | SPO_RS01450 | Not Available | Negative | 298644 - 299168 | 19150.4 |
| aspartate carbamoyltransferase catalytic subunit | SPO_RS01455 | Q5LX75 | Negative | 299165 - 300100 | 34434.9 |
Pathways
1183 pathways
Health Effects
No health effects information available for this bacterium.
