Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2927 domain-containing protein | SPO_RS15140 | Not Available | Positive | 3184625 - 3185512 | 32120.0 |
| spfh domain-containing protein | SPO_RS15145 | Not Available | Positive | 3185540 - 3186655 | 40533.4 |
| cytochrome b | SPO_RS15150 | P16670 | Positive | 3186719 - 3187207 | 17456.7 |
| tfiib-type zinc finger domain-containing protein | SPO_RS15155 | Not Available | Positive | 3187211 - 3188338 | 41852.8 |
| hsp20/alpha crystallin family protein | SPO_RS15160 | Q4UJB1 | Negative | 3188453 - 3188872 | 15541.2 |
| nitroreductase | SPO_RS15165 | Not Available | Positive | 3189013 - 3189681 | 23869.4 |
| d-aminoacyl-trna deacylase | SPO_RS15170 | Q5LP58 | Positive | 3189692 - 3190129 | 15173.3 |
| duf4147 domain-containing protein | SPO_RS15175 | Q9X1S1 | Positive | 3190126 - 3191232 | 36699.3 |
| coce/nond family hydrolase | SPO_RS15180 | P40334 | Positive | 3191283 - 3193277 | 74196.6 |
| abc transporter substrate-binding protein | SPO_RS15185 | Not Available | Positive | 3193403 - 3194986 | 57405.6 |
Pathways
1183 pathways
Health Effects
No health effects information available for this bacterium.
