Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenylate/guanylate cyclase domain-containing protein | SPO_RS15090 | Not Available | Positive | 3174601 - 3175590 | 36033.8 |
| nuclear transport factor 2 family protein | SPO_RS22290 | Not Available | Positive | 3175587 - 3176546 | 34309.4 |
| hypothetical protein | SPO_RS15100 | Not Available | Negative | 3176646 - 3177095 | 16006.9 |
| agmatine/peptidylarginine deiminase | SPO_RS15105 | A4VFL7 | Negative | 3177092 - 3178159 | 38931.2 |
| aaa family atpase | SPO_RS22295 | Not Available | Negative | 3178250 - 3180004 | 65443.9 |
| trna (n6-threonylcarbamoyladenosine(37)-n6)-methyltransferase trmo | SPO_RS15115 | Q6NDF6 | Negative | 3180074 - 3180547 | 17806.3 |
| nucleoside deaminase | SPO_RS15120 | A9CK16 | Negative | 3180549 - 3181028 | 16430.4 |
| pseudouridine synthase | SPO_RS15125 | Q9ZD06 | Positive | 3181090 - 3182253 | 41527.6 |
| 5-bromo-4-chloroindolyl phosphate hydrolysis family protein | SPO_RS15130 | Not Available | Positive | 3182430 - 3183329 | 32533.0 |
| toxic anion resistance protein | SPO_RS15135 | Q8Y5T8 | Positive | 3183355 - 3184545 | 43445.6 |
Pathways
1183 pathways
Health Effects
No health effects information available for this bacterium.
