Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sco family protein | SPO_RS14895 | O75880 | Positive | 3136875 - 3137447 | 20291.3 |
| amidase family protein | SPO_RS14900 | P59385 | Positive | 3137526 - 3138956 | 50638.1 |
| nad kinase | SPO_RS14905 | A4WPE5 | Negative | 3139261 - 3140022 | 27383.0 |
| serine hydroxymethyltransferase | SPO_RS14910 | Q5LPA8 | Positive | 3140191 - 3141486 | 46164.9 |
| duf817 domain-containing protein | SPO_RS14915 | O34535 | Positive | 3141565 - 3142431 | 33131.1 |
| hypothetical protein | SPO_RS14920 | Not Available | Negative | 3142500 - 3142874 | 14169.9 |
| alpha/beta fold hydrolase | SPO_RS14925 | Q3SZ73 | Positive | 3142977 - 3143735 | 27555.1 |
| hypothetical protein | SPO_RS14930 | Not Available | Negative | 3143880 - 3144068 | 6411.09 |
| rhodanese-like domain-containing protein | SPO_RS14935 | Not Available | Negative | 3144144 - 3144527 | 13687.5 |
| nad(p)/fad-dependent oxidoreductase | SPO_RS14940 | Q9LMA1 | Negative | 3144629 - 3146116 | 55285.0 |
Pathways
1183 pathways
Health Effects
No health effects information available for this bacterium.
