Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenosine deaminase | SPO_RS14845 | B9J6V8 | Negative | 3125590 - 3126591 | 36314.6 |
| phosphopentomutase | SPO_RS14850 | A4YPV1 | Negative | 3126588 - 3127799 | 42709.4 |
| thymidine phosphorylase | SPO_RS14855 | A0KPE3 | Negative | 3127796 - 3129106 | 44552.6 |
| cytidine deaminase | SPO_RS14860 | Q9KD53 | Negative | 3129110 - 3129502 | 13170.8 |
| cupin domain-containing protein | SPO_RS14865 | Not Available | Negative | 3129644 - 3130729 | 40580.7 |
| nadp-dependent malic enzyme | SPO_RS14870 | O30807 | Positive | 3130874 - 3133147 | 81807.7 |
| gfa family protein | SPO_RS14875 | Not Available | Positive | 3133190 - 3133579 | 14645.2 |
| propionate-coa ligase prpe | SPO_RS14880 | P28812 | Positive | 3133804 - 3135693 | 68967.6 |
| hypothetical protein | SPO_RS14885 | Not Available | Positive | 3135863 - 3136318 | 16060.1 |
| hypothetical protein | SPO_RS14890 | Not Available | Positive | 3136315 - 3136875 | 20448.3 |
Pathways
1183 pathways
Health Effects
No health effects information available for this bacterium.
