Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna uridine-5-carboxymethylaminomethyl(34) synthesis enzyme mnmg | SPO_RS00005 | Q5LWF3 | Positive | 1 - 1869 | 67570.7 |
| 16s rrna (guanine(527)-n(7))-methyltransferase rsmg | SPO_RS22355 | Q5LWF2 | Positive | 1866 - 2480 | 22644.3 |
| para family protein | SPO_RS00015 | P0CAV7 | Positive | 2473 - 3276 | 29042.9 |
| parb/repb/spo0j family partition protein | SPO_RS00020 | P0CAV8 | Positive | 3299 - 4189 | 32275.7 |
| yban family protein | SPO_RS00025 | P0AAR6 | Negative | 4179 - 4532 | 12633.0 |
| radical sam family heme chaperone hemw | SPO_RS00030 | Q9HA92 | Negative | 4536 - 5693 | 42664.6 |
| rdgb/ham1 family non-canonical purine ntp pyrophosphatase | SPO_RS00035 | Q5LWF7 | Negative | 5683 - 6297 | 22107.2 |
| ribonuclease ph | SPO_RS00040 | Q5LWF6 | Negative | 6294 - 7007 | 25005.2 |
| heat-inducible transcriptional repressor hrca | SPO_RS00045 | P0A3I8 | Positive | 7130 - 8194 | 38981.7 |
| nucleotide exchange factor grpe | SPO_RS00050 | Q3IYI4 | Positive | 8205 - 8768 | 20663.5 |
Pathways
1183 pathways
Health Effects
No health effects information available for this bacterium.
