Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminopeptidase p family protein | SPO_RS14505 | Q8RY11 | Positive | 3054454 - 3056244 | 64634.2 |
| duf427 domain-containing protein | SPO_RS14510 | Not Available | Positive | 3056328 - 3056672 | 12575.9 |
| nad(p)-dependent oxidoreductase | SPO_RS14515 | Not Available | Negative | 3056740 - 3057702 | 33995.1 |
| lysr substrate-binding domain-containing protein | SPO_RS14520 | P52595 | Positive | 3057922 - 3058806 | 31309.8 |
| duf1636 domain-containing protein | SPO_RS14525 | Not Available | Positive | 3059196 - 3059570 | 13499.2 |
| cobalamin biosynthesis protein cobw | SPO_RS14530 | Not Available | Positive | 3059574 - 3060629 | 37751.2 |
| cobaltochelatase subunit cobn | SPO_RS14535 | P29929 | Positive | 3060639 - 3063932 | 117888.0 |
| precorrin-3b synthase | SPO_RS14540 | P21637 | Positive | 3063929 - 3065056 | 39864.2 |
| precorrin-8x methylmutase | SPO_RS14545 | P21638 | Positive | 3065056 - 3065685 | 22200.7 |
| precorrin-2 c(20)-methyltransferase | SPO_RS14550 | P21639 | Positive | 3065682 - 3066410 | 26419.0 |
Pathways
1183 pathways
Health Effects
No health effects information available for this bacterium.
