Ruegeria pomeroyi DSS-3

Gram-negativeBacilliMotileAerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Ruegeria

Description

Ruegeria pomeroyi DSS-3 is a Gram-negative, aerobic bacterium characterized by its bacilli shape and mobility. It is a heterotrophic organism that thrives in aquatic environments. The strain DSS-3 is mesophilic, indicating it prefers moderate temperature ranges for growth. This bacterium is notable for being free-living, which means it does not rely on a host organism for survival. With a single replicon, Ruegeria pomeroyi DSS-3 can efficiently manage its genetic information, contributing to its adaptability in various aquatic habitats. The strain is cataloged under the accession number NC_003911.12. The ecological relevance of Ruegeria pomeroyi DSS-3 lies in its role in marine ecosystems. As a heterotroph, it contributes to the cycling of organic matter in aquatic environments, potentially influencing nutrient dynamics and the overall health of marine ecosystems. Its mobility may also play a significant role in its ability to colonize different niches within these habitats, further enhancing its ecological impact.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusRuegeria
SpeciesRuegeria pomeroyi
StrainDSS-3

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Ruegeria pomeroyi DSS-3, complete sequence.

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf4142 domain-containing proteinSPO_RS01310Not AvailableNegative275275 - 27579918481.0
arac family transcriptional regulatorSPO_RS01315Not AvailablePositive275937 - 27691735858.9
hypothetical proteinSPO_RS01320Not AvailablePositive277030 - 27739513158.5
alkaline phosphataseSPO_RS01325Not AvailablePositive277569 - 27913758482.1
dmt family transporterSPO_RS01330Not AvailableNegative279220 - 28008630438.1
cob(i)yrinic acid a,c-diamide adenosyltransferaseSPO_RS01335Q9I472Negative280092 - 28069122219.3
dmt family transporterSPO_RS01340Not AvailableNegative280748 - 28168633389.2
coa transferaseSPO_RS01345A0A2I6PIZ1Positive281790 - 28312146226.9
aec family transporterSPO_RS01350Not AvailableNegative283122 - 28406332885.6
hd domain-containing proteinSPO_RS01355P46144Negative284060 - 28472223773.1

Displaying genes 281 – 290 of 4001 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.