Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heme no-binding domain-containing protein | SPO_RS13960 | Not Available | Negative | 2939888 - 2940475 | 21693.1 |
| duf4153 domain-containing protein | SPO_RS13965 | P45804 | Negative | 2940563 - 2942338 | 63257.4 |
| trimethylamine methyltransferase family protein | SPO_RS13970 | Not Available | Negative | 2942421 - 2943980 | 57452.7 |
| had family hydrolase | SPO_RS13975 | Not Available | Negative | 2944097 - 2944786 | 23728.3 |
| duf3572 domain-containing protein | SPO_RS13980 | Not Available | Negative | 2944826 - 2945107 | 10159.0 |
| diguanylate cyclase | SPO_RS13985 | Q8Z5R0 | Positive | 2945203 - 2946591 | 49778.3 |
| periplasmic heavy metal sensor | SPO_RS13990 | Not Available | Negative | 2946588 - 2947058 | 17467.2 |
| hypothetical protein | SPO_RS13995 | Not Available | Negative | 2947059 - 2947421 | 12479.8 |
| rna polymerase sigma factor | SPO_RS14000 | Not Available | Negative | 2947411 - 2948013 | 21704.0 |
| ef-hand domain-containing protein | SPO_RS14005 | Not Available | Negative | 2948019 - 2948498 | 16862.9 |
Pathways
1183 pathways
Health Effects
No health effects information available for this bacterium.
