Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| spor domain-containing protein | SPO_RS13910 | Not Available | Positive | 2930226 - 2931107 | 30916.8 |
| d-alanyl-d-alanine carboxypeptidase family protein | SPO_RS13915 | P37604 | Positive | 2931164 - 2932291 | 40339.4 |
| dtmp kinase | SPO_RS13920 | Q5LPV9 | Positive | 2932288 - 2932923 | 23533.0 |
| dna polymerase iii subunit delta' | SPO_RS13925 | P52024 | Positive | 2932920 - 2934041 | 39679.7 |
| tatd family hydrolase | SPO_RS13930 | P44718 | Positive | 2934038 - 2934853 | 29629.1 |
| mbl fold metallo-hydrolase | SPO_RS13935 | Not Available | Positive | 2934850 - 2935650 | 29429.9 |
| aec family transporter | SPO_RS13940 | Not Available | Positive | 2935706 - 2936638 | 33348.6 |
| sirohydrochlorin chelatase | SPO_RS13945 | Not Available | Positive | 2936680 - 2937378 | 24026.9 |
| peptidoglycan-binding domain-containing protein | SPO_RS13950 | Not Available | Negative | 2937381 - 2938625 | 43281.2 |
| ggdef domain-containing protein | SPO_RS13955 | Q9I310 | Negative | 2938815 - 2939891 | 39127.1 |
Pathways
1183 pathways
Health Effects
No health effects information available for this bacterium.
